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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT17, keratin 17
Sequence ID:NM_000422
RefSeqGene ID:NG_008625
Entrez Gene ID:3872
Ensembl ID:ENSG00000128422

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PACHYONYCHIA CONGENITA, JACKSON-LAWLER TYPEKRT6B
STEATOCYSTOMA MULTIPLEX 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39775691 - 39780829

NM_000422 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12493977569139775939
2502723977678739776809
2734933977691039777130
4946193977721739777342
6207813977784439778005
7829383977860639778762
93910213977920139779283
102215743978032939780881

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2986100Full LengthBC000159keratin 17
3531173Full LengthBC072018keratin 17
4111703Full LengthBC011901keratin 17
5208304Full LengthBC056421keratin 17
5442690Full LengthBC072019keratin 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000413  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000422 NP_000413 Q04695 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC000159 AAH00159 Q04695
BC011901 AAH11901 Q04695
BC056421 AAH56421 Q04695
BC072018 AAH72018 Q04695
BC072019 AAH72019 Q04695
DQ891101 ABM82027  
DQ894283 ABM85209  
EF608068 ABQ96595 Q04695
EF608069 ABQ96596 Q04695
EF608071 ABQ96598 Q04695
AK095342 BAC04534 Q04695
AK304373 BAG65211 B4E2P9
X05803 CAA29248 Q14666
X62571 CAA44451 Q04695

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT17 NP_000413 R.norvegicus Krt17 287702   NP_997710 96
M.musculus Krt17 16667 Gene Info NP_034793 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)