Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C11orf42, Chromosome 11 open reading frame 42
Sequence ID:NM_173525
Entrez Gene ID:160298
Ensembl ID:ENSG00000180878

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6226797 - 6232361

NM_173525 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112062267976226916
12191962310796231877
920114262321416232363

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171107Full LengthBC031612chromosome 11 open reading frame 42

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173525 NP_775796 Q8N5U0  

Related Sequences

 
mRNAGenPeptSwissProt
BC031612 AAH31612 Q8N5U0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C11orf42 NP_775796 R.norvegicus RGD1561034 308908   XP_219097 86
M.musculus Gm5901 100503879 Gene Info XP_003084769 86