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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZZEF1, Zinc finger, ZZ-type with EF-hand domain 1
Sequence ID:NM_015113
Entrez Gene ID:23140
Ensembl ID:ENSG00000074755

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 3907739 - 4046253

 Exon Info From UCSC:
NM_015113

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860131Full LengthBC151836zinc finger, ZZ-type with EF-hand domain 1
4748410IncompleteBC035319zinc finger, ZZ-type with EF-hand domain 1
5442645IncompleteBC067099zinc finger, ZZ-type with EF-hand domain 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015113 NP_055928 O43149  

Related Sequences

 
mRNAGenPeptSwissProt
BC067099 AAH67099 O43149
BC151836 AAI51837 O43149
AB007859 BAA23695 O43149
AK001683 BAA91834 O43149
AK127482 BAC86999 O43149
AL831960 CAD38602 Q8N3Q6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZZEF1 NP_055928 M.musculus Zzef1 195018 Gene Info NP_001039001 91
R.norvegicus Zzef1 287476   XP_237787 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)