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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GFM2, G elongation factor, mitochondrial 2
Sequence ID:NM_032380
NM_170681
NM_170691
RefSeqGene ID:NG_011531
Entrez Gene ID:84340
Ensembl ID:ENSG00000164347

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 74017030 - 74062946

 Exon Info From UCSC:
NM_032380
NM_170681
NM_170691

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3922036Full LengthBC015712G elongation factor, mitochondrial 2
4811939Full LengthBC030612G elongation factor, mitochondrial 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_733781  NP_733792  NP_115756  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032380 NP_115756 Q969S9 GTP_EFTU
EFG_C
GTP_EFTU_D2
EFG_IV
NM_170681 NP_733781   GTP_EFTU
GTP_EFTU_D2
NM_170691 NP_733792   GTP_EFTU
EFG_C
MMR_HSR1
EFG_IV

Related Sequences

 
mRNAGenPeptSwissProt
BC015712 AAH15712 Q969S9
BC030612 AAH30612 Q969S9
AF367997 AAK53401 Q969S9
AF111808 AAL39010 Q969S9
AY453587 AAS49035 Q969S9
JF432829 ADZ16046  
AK025314 BAB15109 Q969S9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GFM2 NP_115756 M.musculus Gfm2 320806 Gene Info NP_796240 85
R.norvegicus Gfm2 294672   XP_226707 85
A.gambiae RRF2M_ANOGA 1278061   XP_317594 44
D.melanogaster CG31159 42670   NP_732771 43
S.cerevisiae MEF2 853342   NP_012433 41
S.pombe SPBC660.10 2541108   NP_595089 41
C.elegans Y119D3B.14 191043   NP_497345 39
N.crassa NCU07021 3878324   XP_962160 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)