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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPIL1, peptidylprolyl isomerase (cyclophilin)-like 1
Sequence ID:NM_016059
Entrez Gene ID:51645
Ensembl ID:ENSG00000137168

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 36823298 - 36842774

NM_016059 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1512183682260536823808
121912873682436136824429
128814423683949336839647
144317503684249236842799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3543388Full LengthBC003048peptidylprolyl isomerase (cyclophilin)-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057143  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016059 NP_057143 Q9Y3C6 EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151882 AAD34119 Q9Y3C6 EC 5.2.1.8
BC003048 AAH03048 Q9Y3C6 EC 5.2.1.8
AY359032 AAQ89391 Q9Y3C6 EC 5.2.1.8
DQ892513 ABM83439    
DQ895727 ABM86653    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPIL1 NP_057143 R.norvegicus Ppil1 309651   NP_001029360 99
M.musculus Ppil1 68816 Gene Info NP_081121 98
D.melanogaster Cypl 38069   NP_523874 76
N.crassa NCU00578 3880888   XP_964739 73
A.gambiae AgaP_AGAP012376 4577663   XP_001238262 72
C.elegans cyn-12 191627   NP_501118 68
S.pombe cyp1 2543019   NP_593308 67
A.thaliana AT2G36130 818186   NP_181157 65
P.falciparum PFE1430c 813100   XP_001351841 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)