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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUP93, nucleoporin 93kDa
Sequence ID:NM_001242795
NM_001242796
NM_014669
Entrez Gene ID:9688
Ensembl ID:ENSG00000102900

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 56764078 - 56852648


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4750923Full LengthBC034346nucleoporin 93kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055484  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242795 NP_001229724    
NM_001242796 NP_001229725    
NM_014669 NP_055484 Q8N1F7 NIC

Related Sequences

 
mRNAGenPeptSwissProt
BC034346 AAH34346 Q8N1F7
D42085 BAA07680 Q8N1F7
AK292262 BAF84951 A8K897
AK056637 BAG51770 Q8N1F7
AK294176 BAH11689 Q8N1F7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUP93 NP_055484 M.musculus Nup93 71805 Gene Info NP_765998 98
R.norvegicus Nup93 291874   NP_001011925 98
A.gambiae AgaP_AGAP003459 1272828   XP_311745 42
D.melanogaster CG7262 41804   NP_650404 38
C.elegans npp-13 171774   NP_740802 29
S.cerevisiae NIC96 850552   NP_116657 29
N.crassa NCU01702 3873030   XP_956908 27
S.pombe nup97 2538861   NP_588469 26
S.pombe npp106 2539077   NP_588422 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)