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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SEPP1, selenoprotein P, plasma, 1
Sequence ID:NM_001085486
Entrez Gene ID:6414
Ensembl ID:ENSG00000250722

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 42799989 - 42802100

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4715833Full LengthBC015875selenoprotein P, plasma, 1
5770225Full LengthBC040075selenoprotein P, plasma, 1
6192976Full LengthBC046152selenoprotein P, plasma, 1
6195379Full LengthBC058919selenoprotein P, plasma, 1

Protein Infomation

NM_001085486 NP_001078955    
NM_001093726 NP_001087195    
NM_001134848 NP_001128320 Q4G0S7  
NM_005410 NP_005401 P49908 SelP_N

Related Sequences

BC015875 AAH15875 P49908
BC039102 AAH39102 Q4G0S7
BC040075 AAH40075 P49908
BC046152 AAH46152 P49908
BC058919 AAH58919 P49908
AY947526 AAX21787 Q4G0S7
AK127368 BAG54496 Q4G0S7
AK303469 BAG64509 B4E0P7
Z11793 CAA77836 P49908

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SEPP1 NP_001078955 R.norvegicus Sepp1 29360   NP_062065 73
M.musculus Sepp1 20363 Gene Info NP_001036078 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)