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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARV1, ARV1 homolog (S. cerevisiae)
Sequence ID:NM_022786
Entrez Gene ID:64801
Ensembl ID:ENSG00000173409

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 231114822 - 231136336

NM_022786 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1203231114822231115024
204323231124065231124184
324477231125855231126008
478702231131505231131729
703849231132866231133012
8501437231135883231136470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4047121Full LengthBC016309ARV1 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_073623  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022786 NP_073623 Q9H2C2 Arv1

Related Sequences

 
mRNAGenPeptSwissProt
AF271780 AAG44791 Q9H2C2
AF290878 AAG47671 Q9H2C2
BC016309 AAH16309 Q9H2C2
AF321442 AAK11180 Q9H2C2
HQ447213 ADQ31700  
AK026629 BAB15513 Q9H2C2
AK293049 BAF85738 Q9H2C2
AL122047 CAB59183 Q9H2C2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARV1 NP_073623 M.musculus Arv1 68865 Gene Info NP_081131 82
R.norvegicus Arv1 292097   NP_001099667 82
C.elegans R05H5.5 187628   NP_496202 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)