Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S100A6, S100 calcium binding protein A6
Sequence ID:NM_014624
Entrez Gene ID:6277
Ensembl ID:ENSG00000197956

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153507171 - 153508467

NM_014624 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1231153507075153507305
232390153507677153507835
391683153508424153508716

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138609Full LengthBC001431S100 calcium binding protein A6
4157026Full LengthBC009017S100 calcium binding protein A6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055439  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014624 NP_055439 P06703 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
BC001431 AAH01431 P06703
BC009017 AAH09017 P06703
BT006965 AAP35611 P06703
DQ894935 ABM85861  
EU176296 ABW03747  
D28464 BAA05830  
AK312088 BAG35024 B2R577

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100A6 NP_055439 M.musculus S100a6 20200 Gene Info NP_035443 97
R.norvegicus S100a6 85247   NP_445937 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)