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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BDH1, 3-hydroxybutyrate dehydrogenase, type 1
Sequence ID:NM_004051
NM_203314
NM_203315
Entrez Gene ID:622
Ensembl ID:ENSG00000161267

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 197238444 - 197282822

 Exon Info From UCSC:
NM_004051
NM_203314
NM_203315

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822178Full LengthBC0058443-hydroxybutyrate dehydrogenase, type 1
2822178Full LengthBC0193173-hydroxybutyrate dehydrogenase, type 1
3857464Full LengthBC0119643-hydroxybutyrate dehydrogenase, type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_976060  NP_004042  NP_976059  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004051 NP_004042 Q02338 EC 1.1.1.30 adh_short
NM_203314 NP_976059 Q02338 EC 1.1.1.30 adh_short
NM_203315 NP_976060 Q02338 EC 1.1.1.30 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M93107 AAA58352 Q02338 EC 1.1.1.30
BC005844 AAH05844 Q02338 EC 1.1.1.30
BC011964 AAH11964 Q02338 EC 1.1.1.30
BC019317 AAH19317 Q02338 EC 1.1.1.30
EF095211 ABL01515 A1E284  
HQ447877 ADQ32361    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BDH1 NP_004042 R.norvegicus Bdh1 117099   NP_446447 87
M.musculus Bdh1 71911 Gene Info NP_780386 86
A.gambiae AgaP_AGAP011811 4577659   XP_001238364 33
D.melanogaster CG8888 36293   NP_610724 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)