Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SKIV2L2, Superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Sequence ID:NM_015360
Entrez Gene ID:23517
Ensembl ID:ENSG00000039123

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 54649007 - 54649609

 Exon Info From UCSC:
NM_015360

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4820164Full LengthBC028604superkiller viralicidic activity 2-like 2 (S. cerevisiae)
8143999Full LengthBC104996superkiller viralicidic activity 2-like 2 (S. cerevisiae)
8322561Full LengthBC113509superkiller viralicidic activity 2-like 2 (S. cerevisiae)
4520464IncompleteBC031779superkiller viralicidic activity 2-like 2 (S. cerevisiae)
4849317IncompleteBC014669superkiller viralicidic activity 2-like 2 (S. cerevisiae)
6146338IncompleteBC065258superkiller viralicidic activity 2-like 2 (S. cerevisiae)
6652652IncompleteBC105291superkiller viralicidic activity 2-like 2 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056175  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_015360 NP_056175 P42285 EC 3.6.4.13 DEAD
Helicase_C
DSHCT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC014669 AAH14669 P42285 EC 3.6.4.13
BC028604 AAH28604 P42285 EC 3.6.4.13
BC031779 AAH31779 P42285 EC 3.6.4.13
BC065258 AAH65258 P42285 EC 3.6.4.13
BC104996 AAI04997 P42285 EC 3.6.4.13
BC105291 AAI05292 Q3MHC9  
BC113509 AAI13510 P42285 EC 3.6.4.13
D29641 BAA06124 P42285 EC 3.6.4.13
AK291649 BAF84338 A8K6I4  
AK304788 BAG65538 B4E3M6  
BX640789 CAE45877 P42285 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SKIV2L2 NP_056175 R.norvegicus Skiv2l2 365668   NP_001029265 98
M.musculus Skiv2l2 72198 Gene Info NP_082427 98
D.melanogaster l(2)35Df 48782   NP_524929 65
A.gambiae AgaP_AGAP009600 1278973   XP_318627 64
S.pombe mtr4 2541639   NP_593302 60
A.thaliana AT1G59760 842269   NP_176185 57
C.elegans mtr-4 177824   NP_501757 53
N.crassa NCU03363 3872445   XP_956298 53
S.cerevisiae MTR4 853397   NP_012485 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)