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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NDUFA6, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
Sequence ID:NM_002490
Entrez Gene ID:4700
Ensembl ID:ENSG00000184983

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 42482121 - 42486752

NM_002490 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
208074248153042482317
8089234248306342483178
92412024248660942486887

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3619356Full LengthBC002772NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002481  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002490 NP_002481 P56556 Complex1_LYR

Related Sequences

 
mRNAGenPeptSwissProt
AF047182 AAC04267 P56556
BC002772 AAH02772 P56556
DQ892966 ABM83892  
DQ896214 ABM87213  
AK291874 BAF84563 P56556
AK316562 BAG38151 P56556
CR456529 CAG30415 P56556
CR456714 CAG32995 P56556
CR541997 CAG46794 P56556
CU013129 CAK54560  
CU013417 CAK54859  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDUFA6 NP_002481 M.musculus Ndufa6 67130 Gene Info NP_080263 88
R.norvegicus Ndufa6 315167   NP_001123977 88
D.melanogaster CG7712 36159   NP_610629 50
A.gambiae AgaP_AGAP012533 1267544   XP_306101 46
A.gambiae AgaP_AGAP003328 1275005   XP_314225 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)