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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ASIC1, acid-sensing (proton-gated) ion channel 1
Sequence ID:NM_001095
NM_001256830
NM_020039
NR_046389
Entrez Gene ID:41
Ensembl ID:ENSG00000110881

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 50451636 - 50475775

 Exon Info From UCSC:
NM_001095
NM_020039

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40008524Full LengthBC133707amiloride-sensitive cation channel 2, neuronal
3927471IncompleteBC013891amiloride-sensitive cation channel 2, neuronal

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001086  NP_064423  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001095 NP_001086 P78348 ASC
NM_001256830 NP_001243759    
NM_020039 NP_064423   ASC

Related Sequences

 
mRNAGenPeptSwissProt
U78180 AAB48980 P78348
U78181 AAB48981 P78348
BC013891 AAH13891 P78348
BC133707 AAI33708 P78348
EU078959 ABU48925 P78348
HM991481 ADP44689 E5KBL7
AK290010 BAF82699 A8K1U5
AK293960 BAG57332 B4DF71

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASIC1 NP_001086 R.norvegicus Accn2 79123   NP_077068 98
M.musculus Accn2 11419 Gene Info NP_033727 98
C.elegans degenerin 174069   NP_495302 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)