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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IGFBP6, insulin-like growth factor binding protein 6
Sequence ID:NM_002178
Entrez Gene ID:3489
Ensembl ID:ENSG00000167779

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53491450 - 53495951

NM_002178 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14005349143553491834
4015465349449553494640
5476665349482453494943
6679665349582853496127

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3611314Full LengthBC003507insulin-like growth factor binding protein 6
3640269Full LengthBC005007insulin-like growth factor binding protein 6
3640827Full LengthBC011708insulin-like growth factor binding protein 6
3640964Full LengthBC010162insulin-like growth factor binding protein 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002169  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002178 NP_002169 P24592 Thyroglobulin_1
IGFBP

Related Sequences

 
mRNAGenPeptSwissProt
M69054 AAA88070 P24592
M62402 AAB06187 P24592
BC003507 AAH03507 P24592
BC005007 AAH05007 P24592
BC010162 AAH10162 P24592
BC011708 AAH11708 P24592
DQ892995 ABM83921  
DQ896243 ABM87242  
AK313158 BAG35976  
CR541791 CAG46590 P24592

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IGFBP6 NP_002169 R.norvegicus Igfbp6 25641   NP_037236 72
M.musculus Igfbp6 16012 Gene Info NP_032370 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta