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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase
Sequence ID:NM_033133
Entrez Gene ID:1267
Ensembl ID:ENSG00000173786

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40118812 - 40127192

NM_033133 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11474011875840118904
1488204012008540120757
8219604012390940124048
96152224012549240129753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051112Full LengthBC0013622',3'-cyclic nucleotide 3' phosphodiesterase
4126696Full LengthBC0063922',3'-cyclic nucleotide 3' phosphodiesterase
4179083Full LengthBC0110462',3'-cyclic nucleotide 3' phosphodiesterase
5248370Full LengthBC0280402',3'-cyclic nucleotide 3' phosphodiesterase
4814196IncompleteBC0455612',3'-cyclic nucleotide 3' phosphodiesterase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149124  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_033133 NP_149124 P09543 EC 3.1.4.37 CNPase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M19650 AAA35704 P09543 EC 3.1.4.37
BC001362 AAH01362 P09543 EC 3.1.4.37
BC006392 AAH06392 P09543 EC 3.1.4.37
BC011046 AAH11046 P09543 EC 3.1.4.37
BC028040 AAH28040 P09543 EC 3.1.4.37
DQ892575 ABM83501    
DQ895791 ABM86717    
D28445 BAA05811    
AK294179 BAG57497 B4DFN6  
AK295351 BAG58318 B4DI06  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNP NP_149124 R.norvegicus Cnp 25275   NP_036941 86
M.musculus Cnp 12799 Gene Info NP_034053 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)