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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V1D, ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
Sequence ID:NM_015994
Entrez Gene ID:51382
Ensembl ID:ENSG00000100554

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23-q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 67804787 - 67826583

NM_015994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
88976780458967805478
8989766780715667807234
97710436781008867810154
104411476781248467812587
114811926781412567814169
119312606781575367815820
126113406781732767817406
134114586781963967819756
145916756782637467826590

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140126Full LengthBC001411ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
3686772Full LengthBC031002ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
4108457Full LengthBC025373ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057078  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015994 NP_057078 Q9Y5K8 ATP-synt_D

Related Sequences

 
mRNAGenPeptSwissProt
AF145316 AAD33953 Q9Y5K8
AF100741 AAD40384 Q9Y5K8
AF104629 AAG30726 Q9Y5K8
AF077614 AAG43047 Q9H3H0
BC001411 AAH01411 Q9Y5K8
BC025373 AAH25373 Q6PJ05
BC031002 AAH31002 Q8N5Z9
HQ447570 ADQ32056  
AK001155 BAA91523 Q9NW63
AK315784 BAG38130 Q9Y5K8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V1D NP_057078 R.norvegicus Atp6v1d 299159   NP_955418 99
M.musculus Atp6v1d 73834 Gene Info NP_076210 98
A.gambiae AgaP_AGAP010298 1278594   XP_318202 73
D.melanogaster Vha36 44702   NP_651987 73
C.elegans vha-14 176338   NP_499094 71
S.cerevisiae VMA8 856659   NP_010863 54
N.crassa NCU08035 3878812   XP_962705 54
S.pombe vma8 2539581   NP_588513 49
P.falciparum PF13_0227 814194   XP_001350140 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)