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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FBXO40, F-box protein 40
Sequence ID:NM_016298
Entrez Gene ID:51725
Ensembl ID:ENSG00000163833

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 121311965 - 121349139

NM_016298 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1180121312169121312348
181213121339392121339424
2142124121340279121342189
21255722121345541121349138

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40028315Full LengthBC109275F-box protein 40
40028318Full LengthBC109276F-box protein 40

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057382  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016298 NP_057382 Q9UH90 F-box

Related Sequences

 
mRNAGenPeptSwissProt
AF204674 AAF17085 Q9UH90
BC109275 AAI09276 Q9UH90
BC109276 AAI09277 Q9UH90
AF163259 AAQ13588 Q7Z2T7
AB033021 BAA86509 Q9UH90
AK314400 BAG37024 Q9UH90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FBXO40 NP_057382 M.musculus Fbxo40 207215 Gene Info NP_001032398 85
R.norvegicus Fbxo40 363790   XP_344024 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)