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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX21, T-box 21
Sequence ID:NM_013351
RefSeqGene ID:NG_012166
Entrez Gene ID:30009
Ensembl ID:ENSG00000073861

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ASTHMA, ASPIRIN-INDUCEDPTGER2

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 45810609 - 45823485

NM_013351 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17024581060945811310
7038574581997545820129
8589794582043645820557
98011384582156045821718
113912004582184745821908
120125724582211345823484

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6067371Full LengthBC039739T-box 21

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037483  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013351 NP_037483 Q9UL17 T-box

Related Sequences

 
mRNAGenPeptSwissProt
AF093098 AAF00055 Q9UL17
AF241243 AAF61243 Q9UL17
BC039739 AAH39739 Q9UL17
AK223634 BAD97354 Q53EK5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX21 NP_037483 M.musculus Tbx21 57765 Gene Info NP_062380 88
R.norvegicus Tbx21 303496   NP_001100513 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)