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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CDH9, cadherin 9, type 2 (T1-cadherin)
Sequence ID:NM_016279
Entrez Gene ID:1007
Ensembl ID:ENSG00000113100

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 26880708 - 27038674

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40011941Full LengthBC113745cadherin 9, type 2 (T1-cadherin)
40011942Full LengthBC107594cadherin 9, type 2 (T1-cadherin)
40011943IncompleteBC109384cadherin 9, type 2 (T1-cadherin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057363  

Protein Infomation

NM_016279 NP_057363 Q9ULB4 Cadherin

Related Sequences

BC107594 AAI07595 Q9ULB4
BC109384 AAI09385 Q32LY1
BC113745 AAI13746 Q9ULB4
AB035302 BAA87416 Q9ULB4
AK294183 BAG57501 B4DFP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CDH9 NP_057363 R.norvegicus Cdh9 29163   NP_001162101 92
M.musculus Cdh9 12565 Gene Info NP_033999 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)