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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNC2, potassium voltage-gated channel, Shaw-related subfamily, member 2
Sequence ID:NM_001260497
NM_001260498
NM_001260499
NM_139136
NM_139137
NM_153748
Entrez Gene ID:3747
Ensembl ID:ENSG00000166006

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 75433857 - 75603227

 Exon Info From UCSC:
NM_139136
NM_139137
NM_153748

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939480Full LengthBC093635potassium voltage-gated channel, Shaw-related subfamily, member 2
8327459Full LengthBC111991potassium voltage-gated channel, Shaw-related subfamily, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_715624  NP_631874  NP_631875  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001260497 NP_001247426    
NM_001260498 NP_001247427    
NM_001260499 NP_001247428    
NM_139136 NP_631874   Ion_trans
K_tetra
NM_139137 NP_631875 Q96PR1 Ion_trans
K_tetra
NM_153748 NP_715624   Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
BC093635 AAH93635 Q96PR1
BC111991 AAI11992 Q96PR1
AF268896 AAL27272 Q96PR1
AF268897 AAL27273 Q96PR1
AY118169 AAM81577 Q96PR1
AY243473 AAO89503 Q96PR1
AK094720 BAC04407 Q96PR1
AB209994 BAE06076 Q96PR1
AK294269 BAH11717 B7Z231

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNC2 NP_631875 R.norvegicus Kcnc2 246153   NP_631963 98
M.musculus Kcnc2 268345 Gene Info NP_001020752 98
A.gambiae AgaP_AGAP008200 1277771   XP_317268 55
D.melanogaster Shaw 33599   NP_001137782 55
C.elegans F14F11.1 174331   NP_001022089 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)