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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. B4GALT1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
Sequence ID:NM_001497
RefSeqGene ID:NG_008919
Entrez Gene ID:2683
Ensembl ID:ENSG00000086062

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 33112903 - 33167184

NM_001497 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1629613311063833113583
296230663311377133113875
306731893311598833116110
319033773312041633120603
337836133313518633135421
361442143316675533167355

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4837872Full LengthBC045773UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001488  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001497 NP_001488 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
Galactosyl_T_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M13701 AAA35935 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
M22921 AAA35936 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
M22921 AAA35937 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
U10472 AAA68218 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
U10473 AAA68219 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
U10474 AAA68220 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
BC045773 AAH45773 Q86XA6  
D29805 BAA06188 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
AK312797 BAG35657 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
AK296928 BAG59480 B4DLB8  
AK297541 BAG59940 B4DMM8  
AK316294 BAH14665 B7ZAH9  
A23697 CAA01685    
X13223 CAA31611 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
X14085 CAA32247 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
X55415 CAA39073 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90
X55415 CAA39074 P15291 EC 2.4.1.38
EC 2.4.1.22
EC 2.4.1.90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B4GALT1 NP_001488 R.norvegicus B4galt1 24390   NP_445739 88
M.musculus B4galt1 14595 Gene Info NP_071641 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)