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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATR, ataxia telangiectasia and Rad3 related
Sequence ID:NM_001184
RefSeqGene ID:NG_008951
Entrez Gene ID:545
Ensembl ID:ENSG00000175054

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CUTANEOUS TELANGIECTASIA ANDCANCER SYNDROME, FAMILIAL 
SECKEL SYNDROME 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 142168079 - 142188269

 Exon Info From UCSC:
NM_001184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069098Full LengthBC172404ataxia telangiectasia and Rad3 related

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001184 NP_001175 Q13535 EC 2.7.11.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U49844 AAC50405 Q13535 EC 2.7.11.1
U76308 AAC50929 Q13535 EC 2.7.11.1
BC172404 AAI72404    
AB208847 BAD92084 Q13535 EC 2.7.11.1
Y09077 CAA70298 Q13535 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATR NP_001175 M.musculus Atr 245000 Gene Info NP_063917 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta