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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMBRD1, LMBR1 domain containing 1
Sequence ID:NM_018368
RefSeqGene ID:NG_016012
Entrez Gene ID:55788
Ensembl ID:ENSG00000168216

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 70503631 - 70506479

 Exon Info From UCSC:
NM_018368

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5274221Full LengthBC047073LMBR1 domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060838  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018368 NP_060838 Q9NUN5 LMBR1

Related Sequences

 
mRNAGenPeptSwissProt
AF208863 AAF64277 Q9NUN5
AF113224 AAG39295 Q9NUN5
BC010360 AAH10360 Q9NUN5
BC047073 AAH47073 Q9NUN5
AF211480 AAK26247 Q9NUN5
AY136817 AAN11301 Q9NUN5
AK002102 BAA92087 Q9NUN5
AK290069 BAF82758 Q9NUN5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMBRD1 NP_060838 M.musculus Lmbrd1 68421 Gene Info NP_080995 94
R.norvegicus Lmbrd1 246046   NP_631928 93
N.crassa NCU02100 3880243   XP_964094 33
P.falciparum MAL13P1.189 813743   XP_001350107 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)