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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RABGAP1, RAB GTPase activating protein 1
Sequence ID:NM_012197
Entrez Gene ID:23637
Ensembl ID:ENSG00000011454

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 125719338 - 125865492

 Exon Info From UCSC:
NM_012197

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5785896Full LengthBC054492RAB GTPase activating protein 1
4768130IncompleteBC020609RAB GTPase activating protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036329  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012197 NP_036329 Q9Y3P9 TBC

Related Sequences

 
mRNAGenPeptSwissProt
AF161357 AAF28917 Q9Y3P9
BC020609 AAH20609 Q9Y3P9
BC054492 AAH54492 Q9Y3P9
AK131449 BAD18594 Q9Y3P9
AK294531 BAH11800 B7Z2B4
AB449897 BAH16640 Q9Y3P9
AJ011679 CAB40267 Q9Y3P9
AL050195 CAB43313 Q9Y3P9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RABGAP1 NP_036329 M.musculus Rabgap1 227800 Gene Info NP_666233 98
R.norvegicus Rabgap1 311911   NP_001101311 97
D.melanogaster CG7112 38945   NP_001097549 44
A.gambiae AgaP_AGAP007332 1269845   XP_308497 43
C.elegans tbc-11 180444   NP_508179 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)