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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RGMA, RGM domain family, member A
Sequence ID:NM_001166283
NM_001166286
NM_001166287
NM_001166288
NM_001166289
NM_020211
Entrez Gene ID:56963
Ensembl ID:ENSG00000182175

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 93586636 - 93632433

 Exon Info From UCSC:
NM_001166283
NM_001166286
NM_001166287
NM_001166288
NM_001166289
NM_020211

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021706Full LengthBC140838RGM domain family, member A
9057032Full LengthBC151132RGM domain family, member A
3909548IncompleteBC015886RGM domain family, member A
40133362IncompleteBC127826RGM domain family, member A
100001739BC146682RGM domain family, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064596  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166283 NP_001159755    
NM_001166286 NP_001159758    
NM_001166287 NP_001159759    
NM_001166288 NP_001159760    
NM_001166289 NP_001159761    
NM_020211 NP_064596   RGM_C
RGM_N

Related Sequences

 
mRNAGenPeptSwissProt
BC015886 AAH15886 Q96B86
BC127826 AAI27827 A1L187
BC140838 AAI40839 Q96B86
BC146682 AAI46683  
BC151132 AAI51133 Q96B86
AK074910 BAC11285 Q96B86
AK074966 BAC11321 Q96B86
AK074980 BAC11330 Q96B86
AK125204 BAG54165 B3KWK3
AK299363 BAH13014 B7Z5S8
AL136826 CAB66760 Q96B86
AL390083 CAB98207 Q96B86
AM392685 CAL37563  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RGMA NP_001159755 M.musculus Rgma 244058 Gene Info NP_808408 93
R.norvegicus Rgma 308739   NP_001100994 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)