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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EXOC1, Exocyst complex component 1
Sequence ID:NM_001024924
NM_018261
NM_178237
Entrez Gene ID:55763
Ensembl ID:ENSG00000090989

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 56744177 - 56771175

 Exon Info From UCSC:
NM_001024924
NM_018261
NM_178237

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4828034Full LengthBC094751exocyst complex component 1
3935158IncompleteBC019237exocyst complex component 1
4243918IncompleteBC020650exocyst complex component 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024924 NP_001020095 Q9NV70  
NM_018261 NP_060731 Q9NV70  
NM_178237 NP_839955    

Related Sequences

 
mRNAGenPeptSwissProt
AF208854 AAF64268 Q9NV70
BC019237 AAH19237 A0PJ99
BC020650 AAH20650 Q9NV70
BC094751 AAH94751 Q9NV70
AK001755 BAA91886 Q9NV70
AK027413 BAB55095 Q9NV70

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EXOC1 NP_001020095 M.musculus Exoc1 69940 Gene Info NP_081546 97
D.melanogaster sec3 39940   NP_648976 44
A.gambiae AgaP_AGAP012417 1280298   XP_551765 42
C.elegans sec-3 180598   NP_508530 36
A.thaliana SEC3A 841164   NP_001185163 27
A.thaliana SEC3B 841165   NP_175187 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)