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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDK5RAP2, CDK5 regulatory subunit associated protein 2
Sequence ID:NM_001011649
NM_018249
RefSeqGene ID:NG_008999
Entrez Gene ID:55755
Ensembl ID:ENSG00000136861

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MICROCEPHALY 3, PRIMARY, AUTOSOMAL RECESSIVE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q33.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 123151153 - 123342417

 Exon Info From UCSC:
NM_001011649
NM_018249

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007237Full LengthBC146782CDK5 regulatory subunit associated protein 2
9020262Full LengthBC136275CDK5 regulatory subunit associated protein 2
9052276Full LengthBC143762CDK5 regulatory subunit associated protein 2
4937907IncompleteBC019577CDK5 regulatory subunit associated protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060719  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001011649 NP_001011649    
NM_018249 NP_060719 Q96SN8 Microtub_assoc

Related Sequences

 
mRNAGenPeptSwissProt
BC004526 AAH04526 Q96SN8
BC019577 AAH19577 Q05CZ3
BC136275 AAI36276 B9EG74
BC143762 AAI43763 B7ZLE9
BC146782 AAI46783 A6H8X1
AF448860 AAP41926 Q96SN8
AK001729 BAA91865 Q96SN8
AB046853 BAB13459 Q96SN8
AK025867 BAB15263 Q96SN8
AK027636 BAB55253 Q96SN8
AK122913 BAG53794 B3KVI2
AL133161 CAB61487 Q96SN8
BX537421 CAD97663 Q96SN8
BX537708 CAD97819 Q7Z3M0
BX537759 CAD97828 Q96SN8
BX640896 CAE45944 Q6MZT4
CR936622 CAI56765 Q5CZA0
BK005504 DAA05504 Q66GT8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDK5RAP2 NP_060719 M.musculus Cdk5rap2 214444 Gene Info NP_666102 71
R.norvegicus Cdk5rap2 286919   XP_575844 71
D.melanogaster cnn 36491   NP_725298 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)