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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. E2F3, E2F transcription factor 3
Sequence ID:NM_001243076
NM_001949
RefSeqGene ID:NG_029591
Entrez Gene ID:1871
Ensembl ID:ENSG00000112242

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 20491992 - 20493791

Transcript StartTranscript EndChromosomal Start Chromosomal End
17202040213620402855
7218322048007620480187
83310522048143620481655
105312112048299220483150
121213262048691920487033
132714622048834320488478
146350092049039820493944

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069220Full LengthBC172526E2F transcription factor 3
100062592BC156367E2F transcription factor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001940  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243076 NP_001230005    
NM_001949 NP_001940 O00716 E2F_TDP

Related Sequences

 
mRNAGenPeptSwissProt
BC016847 AAH16847 Q96AR0
BC099908 AAH99908 Q499G5
BC114554 AAI14555 Q24JQ3
BC156367 AAI56368  
BC172526 AAI72526  
D38550 BAA07553 O00716
Y10479 CAA71504 O00716
CR749285 CAH18140 Q68DT0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens E2F3 NP_001940 M.musculus E2f3 13557 Gene Info NP_034223 96
R.norvegicus E2f3 291105   NP_001131098 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)