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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPTBN2, spectrin, beta, non-erythrocytic 2
Sequence ID:NM_006946
RefSeqGene ID:NG_016150
Entrez Gene ID:6712
Ensembl ID:ENSG00000173898

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SPINOCEREBELLAR ATAXIA 5 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 66452722 - 66488870

 Exon Info From UCSC:
NM_006946

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069132Full LengthBC172438spectrin, beta, non-erythrocytic 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008877  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006946 NP_008877 O15020 PH
CH
Spectrin

Related Sequences

 
mRNAGenPeptSwissProt
AF026487 AAC79502 O15020
AF026488 AAC79503 O15020
AF026488 AAC79504 O15020
AF079569 AAC80006 O15020
BC139788 AAI39789 A4QPE4
BC172438 AAI72438  
AB008567 BAA32700 O15020

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTBN2 NP_008877 M.musculus Spnb3 20743 Gene Info NP_067262 95
R.norvegicus Sptbn2 29211   NP_062040 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)