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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEMA3C, Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
Sequence ID:NM_006379
Entrez Gene ID:10512
Ensembl ID:ENSG00000075223

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21-q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 80371854 - 80548667

 Exon Info From UCSC:
NM_006379

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4824598Full LengthBC030690sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006370  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006379 NP_006370 Q99985 Sema

Related Sequences

 
mRNAGenPeptSwissProt
BC030690 AAH30690 Q99985
DQ890847 ABM81773  
DQ894001 ABM84927  
AB000220 BAA32398 Q99985
AK312478 BAG35382  
AK299322 BAG61330 B4DRL8
AK304294 BAG65151 B4E2I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEMA3C NP_006370 M.musculus Sema3c 20348 Gene Info NP_038685 97
R.norvegicus Sema3c 296787   NP_001100048 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)