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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. JARID2, Jumonji, AT rich interactive domain 2
Sequence ID:NM_004973
NM_001267040
Entrez Gene ID:3720
Ensembl ID:ENSG00000008083

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p24-p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 15512558 - 15513221


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4520786Full LengthBC046246jumonji, AT rich interactive domain 2
5393382IncompleteBC046184jumonji, AT rich interactive domain 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004964  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001267040 NP_001253969    
NM_004973 NP_004964 Q92833 ARID
JmjC
JmjN
zf-C5HC2

Related Sequences

 
mRNAGenPeptSwissProt
U57592 AAC50822 Q92833
BC046184 AAH46184 Q92833
BC046246 AAH46246 Q92833
AF401209 AAL02168 Q96PA1
AK292861 BAF85550 Q92833
AK299349 BAH13011 Q92833
AK302624 BAH13765 B7Z7X9
AK303610 BAH13996 B7Z8L0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens JARID2 NP_004964 M.musculus Jarid2 16468 Gene Info NP_068678 93
A.gambiae AgaP_AGAP005541 1276224   XP_315541 34
D.melanogaster Jarid2 39103   NP_648324 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)