Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBAP1, Ubiquitin associated protein 1
Sequence ID:NM_001171203
NM_001171204
NM_016525
NM_001171201
NM_001171202
Entrez Gene ID:51271
Ensembl ID:ENSG00000165006

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 34186266 - 34188020

 Exon Info From UCSC:
NM_001171203
NM_001171204
NM_016525
NM_001171201
NM_001171202

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3851813Full LengthBC020950ubiquitin associated protein 1
40011243Full LengthBC100668ubiquitin associated protein 1
40011247Full LengthBC098141ubiquitin associated protein 1
40011248Full LengthBC098316ubiquitin associated protein 1
40011249Full LengthBC099726ubiquitin associated protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171201 NP_001164672    
NM_001171202 NP_001164673    
NM_001171203 NP_001164674    
NM_001171204 NP_001164675    
NM_016525 NP_057609 Q9NZ09  

Related Sequences

 
mRNAGenPeptSwissProt
AF222043 AAF37827 Q9NZ09
AF130079 AAG35505 Q9H397
BC020950 AAH20950 Q9NZ09
BC098141 AAH98141 Q9NZ09
BC098316 AAH98316 Q9NZ09
BC099726 AAH99726 Q9NZ09
BC100668 AAI00669 Q9NZ09
DQ891690 ABM82616  
DQ894873 ABM85799  
AK074724 BAC11162 Q9NZ09
AK074745 BAC11176 Q9NZ09
AK074812 BAC11224 Q9NZ09
AK074969 BAC11323 Q9NZ09
AK074995 BAC11342 Q9NZ09
AK223235 BAD96955 Q9NZ09
AK295482 BAH12084 B7Z348
AK303711 BAH14025 B7Z8N9
AL136733 CAB66667 Q9NZ09
CR533551 CAG38582 Q9NZ09
AM393865 CAL38740  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBAP1 NP_001164674 M.musculus Ubap1 67123 Gene Info NP_075794 91
R.norvegicus Ubap1 362502   NP_001012190 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)