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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARIH1, ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
Sequence ID:NM_005744
Entrez Gene ID:25820
Ensembl ID:ENSG00000166233

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 72862617 - 72875633

 Exon Info From UCSC:
NM_005744

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5742498Full LengthBC051877ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005744 NP_005735 Q9Y4X5  

Related Sequences

 
mRNAGenPeptSwissProt
AF072832 AAD28088 Q9Y4X5
BC051877 AAH51877 Q9Y4X5
AB014774 BAB19786 Q9Y4X5
AB209432 BAD92669 Q59FM8
AK312715 BAG35590 Q9Y4X5
AJ009771 CAA08817 Q9Y4X5
AJ130976 CAA10274 Q9Y4X5
AJ243190 CAB45870 Q9Y4X5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARIH1 NP_005735 R.norvegicus Arih1 300756   NP_001013126 99
M.musculus Arih1 23806 Gene Info NP_064311 99
A.gambiae AgaP_AGAP010891 1271056   XP_309801 72
D.melanogaster ari-1 32796   NP_996500 71
C.elegans ari-1 172284   NP_491749 57
C.elegans C27A12.6 172282   NP_491747 52
C.elegans C27A12.7 172283   NP_491748 50
C.elegans tag-349 178437   NP_001041060 48
S.pombe SPAC328.02 2543148   NP_594204 47
N.crassa NCU06882 3875401   XP_959229 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)