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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POMP, proteasome maturation protein
Sequence ID:NM_015932
RefSeqGene ID:NG_027550
Entrez Gene ID:51371
Ensembl ID:ENSG00000132963

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 29233240 - 29252336

NM_015932 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1842923324029233323
851822923654629236643
1832432923864529238705
2443452924260929242710
3464392924647529246568
44013592925217129253090

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3446986Full LengthBC003390proteasome maturation protein
4045091Full LengthBC014334proteasome maturation protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057016  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015932 NP_057016 Q9Y244 UMP1

Related Sequences

 
mRNAGenPeptSwissProt
AF077200 AAD26995 Q9Y244
AF125097 AAD39914 Q9Y244
AF275807 AAG23819 Q9Y244
BC003390 AAH03390 Q9Y244
BC014334 AAH14334 Q9Y244
AF262975 AAK58521 Q9Y244
DQ894129 ABM85055  
EF535527 ABQ08566 Q9Y244
GU045555 ADE92939 Q9Y244
GU045556 ADE92940 Q9Y244
AK312118 BAG35054 Q9Y244

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POMP NP_057016 R.norvegicus Pomp 288455   NP_001094412 96
M.musculus Pomp 66537 Gene Info NP_079900 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)