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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SHANK2, SH3 and multiple ankyrin repeat domains 2
Sequence ID:NM_012309
Entrez Gene ID:22941
Ensembl ID:ENSG00000162105

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 70315539 - 70348964

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068268Full LengthBC168372SH3 and multiple ankyrin repeat domains 2
5273763IncompleteBC041371SH3 and multiple ankyrin repeat domains 2
40054125IncompleteBC113876SH3 and multiple ankyrin repeat domains 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573573  

Protein Infomation

NM_012309 NP_036441    
NM_133266 NP_573573   PDZ

Related Sequences

AF141901 AAF02496 Q9UPX8
BC093885 AAH93885 Q9UPX8
BC112097 AAI12098 Q9UPX8
BC114484 AAI14485 Q24JS4
BC143389 AAI43390 B7ZKU9
BC168372 AAI68372  
DQ152234 AAZ77790 Q9UPX8
AB028945 BAA82974 Q9UPX8
AB208025 BAH37016 Q9UPX8
AB208026 BAH37017 Q9UPX8
AB208027 BAH37018 C0SPH0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SHANK2 NP_036441 R.norvegicus Shank2 171093   NP_958738 90
M.musculus Shank2 210274 Gene Info NP_001106844 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)