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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CNOT8, CCR4-NOT transcription complex, subunit 8
Sequence ID:NM_004779
Entrez Gene ID:9337
Ensembl ID:ENSG00000155508

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31-q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 154238208 - 154256343

NM_004779 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1179154238197154238375
180368154242766154242954
369562154244751154244944
563724154250220154250381
725869154251289154251433
870980154252100154252210
9812482154254849154256350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506054Full LengthBC017366CCR4-NOT transcription complex, subunit 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004770  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004779 NP_004770 Q9UFF9 CAF1

Related Sequences

 
mRNAGenPeptSwissProt
AF053318 AAD02685 Q9UFF9
AF180476 AAF29830 Q9UFF9
BC017366 AAH17366 Q9UFF9
BT006857 AAP35503 Q9UFF9
AF087844 AAP97157 Q9UFF9
AK025358 BAB15119 Q9UFF9
AK315864 BAF98755 B0AZS3
AK314317 BAG36965 Q9UFF9
AK297381 BAH12567 B0AZS3
AK299589 BAH13076 B7Z5Z0
AK303775 BAH14047 B7Z8R1
AK316055 BAH14426 B7Z9U0
AK316221 BAH14592 B0AZS3
AK316269 BAH14640 B0AZS3
AL122045 CAB59181 Q9UFF9
AM393646 CAL38522  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNOT8 NP_004770 M.musculus Cnot8 69125 Gene Info NP_081225 99
R.norvegicus Cnot8 363603   NP_001008383 99
A.thaliana AT1G80780 844417   NP_178193 54
A.thaliana AT2G32070 817767   NP_565735 54
A.thaliana AT5G10960 830963   NP_196657 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)