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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HDAC10, histone deacetylase 10
Sequence ID:NM_001159286
NM_032019
RefSeqGene ID:NG_029758
Entrez Gene ID:83933
Ensembl ID:ENSG00000100429

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 50683935 - 50689461

 Exon Info From UCSC:
NM_001159286
NM_032019

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117772Full LengthBC125083histone deacetylase 10
4824678IncompleteBC094734histone deacetylase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114408  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001159286 NP_001152758      
NM_032019 NP_114408 Q969S8 EC 3.5.1.98 Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC125082 AAI25083 Q08AP5  
BC125083 AAI25084 Q969S8 EC 3.5.1.98
AF393962 AAK84023 Q969S8 EC 3.5.1.98
AF407272 AAK92205 Q969S8 EC 3.5.1.98
AF407273 AAK92206 Q969S8 EC 3.5.1.98
AF426160 AAL30513 Q969S8 EC 3.5.1.98
AY450395 AAS48345 Q969S8 EC 3.5.1.98
AL512711 CAC21653 Q969S8 EC 3.5.1.98
CR456465 CAG30351 Q969S8 EC 3.5.1.98
CU013015 CAK54446    
CU013303 CAK54745    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HDAC10 NP_114408 M.musculus Hdac10 170787 Gene Info NP_954668 76
R.norvegicus Hdac10 362981   NP_001030172 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)