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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PNPLA4, Patatin-like phospholipase domain containing 4
Sequence ID:NM_004650
NM_001142389
NM_001172672
RefSeqGene ID:NG_016624
Entrez Gene ID:8228
Ensembl ID:ENSG00000006757

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 7868257 - 7895425

 Exon Info From UCSC:
NM_004650
NM_001142389
NM_001172672

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4717901Full LengthBC020746patatin-like phospholipase domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004641  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001142389 NP_001135861      
NM_001172672 NP_001166143      
NM_004650 NP_004641 P41247 EC 3.1.1.3 Patatin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U03886 AAA16491 P41247 EC 3.1.1.3
BC020746 AAH20746 P41247 EC 3.1.1.3
DQ891399 ABM82325    
DQ894578 ABM85504    
AK289888 BAF82577 P41247 EC 3.1.1.3
AK304586 BAG65374 P41247 EC 3.1.1.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PNPLA4 NP_001135861 R.norvegicus RGD1562200 363471   XP_343791 62
C.elegans D1054.1 179492   NP_505749 43
C.elegans B0524.2 182024   NP_497474 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)