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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC22, coiled-coil domain containing 22
Sequence ID:NM_014008
RefSeqGene ID:NG_021311
Entrez Gene ID:28952
Ensembl ID:ENSG00000101997

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 49092010 - 49106980

 Exon Info From UCSC:
NM_014008

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449051Full LengthBC000972coiled-coil domain containing 22
4299954Full LengthBC011675coiled-coil domain containing 22

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054727  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014008 NP_054727 O60826 DUF812

Related Sequences

 
mRNAGenPeptSwissProt
BC000972 AAH00972 O60826
BC011675 AAH11675 O60826
DQ894170 ABM85096  
EU176573 ABW03374  
AK291976 BAF84665 O60826
AK296911 BAG59466 B4DLA4
AK298264 BAG60528 B4DPB6
AK316375 BAH14746 B7ZAR0
AJ005890 CAA06747 O60826

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC22 NP_054727 M.musculus Ccdc22 54638 Gene Info NP_613069 88
R.norvegicus Ccdc22 317381   NP_001129309 88
A.gambiae CCD22_ANOGA 1280847   XP_320714 39
A.thaliana AT1G55830 842033   NP_001185244 34
D.melanogaster CG9951 39888   NP_648929 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)