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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DSG1, desmoglein 1
Sequence ID:NM_001942
RefSeqGene ID:NG_011803
Entrez Gene ID:1828
Ensembl ID:ENSG00000134760

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
KERATOSIS PALMOPLANTARIS STRIATA IKRT1

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 28935855 - 28936344

 Exon Info From UCSC:
NM_001942

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016255Full LengthBC153001desmoglein 1
100015331BC148374desmoglein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001933  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001942 NP_001933 Q02413 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
AF097935 AAC83817 Q02413
BC148374 AAI48375  
BC153001 AAI53002  
AK302888 BAH13831 B7Z845
X56654 CAA39976 Q02413

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DSG1 NP_001933 M.musculus Dsg1b 225256 Gene Info NP_859010 81
M.musculus Dsg1a 13510 Gene Info NP_034209 81
R.norvegicus Dsg1b 291755   XP_214616 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)