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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PANK4, pantothenate kinase 4
Sequence ID:NM_018216
Entrez Gene ID:55229
Ensembl ID:ENSG00000157881

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 2439974 - 2458035

 Exon Info From UCSC:
NM_018216

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5244472Full LengthBC043496pantothenate kinase 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060686  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_018216 NP_060686 Q9NVE7 EC 2.7.1.33 Fumble

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC043496 AAH43496 Q9NVE7 EC 2.7.1.33
AK001644 BAA91805 Q9NVE7 EC 2.7.1.33
AK223546 BAD97266 Q9NVE7 EC 2.7.1.33
AK295301 BAG58281 B4DHW9  
AK303127 BAG64233 B4DZX1  
AL442072 CAC09438 Q9NVE7 EC 2.7.1.33
CR749728 CAH18490 Q68CU4  
BK000012 DAA00006 Q9NVE7 EC 2.7.1.33
BK000013 DAA00007 Q7RTX2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PANK4 NP_060686 M.musculus Pank4 269614 Gene Info NP_766578 92
R.norvegicus Pank4 171053   NP_598215 92
N.crassa NCU03154 3880725   XP_964560 52
S.pombe SPBC4B4.01c 2540815   NP_596418 49
S.cerevisiae CAB1 852144   NP_010820 47
A.thaliana PANK2 829351   NP_194945 46
D.melanogaster CG5828 33742   NP_608907 46
A.gambiae AgaP_AGAP010073 1279504   XP_319230 42
C.elegans uvt-3 180779   NP_508866 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)