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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXJ3, forkhead box J3
Sequence ID:NM_001198850
NM_001198851
NM_001198852
NM_014947
Entrez Gene ID:22887
Ensembl ID:ENSG00000198815

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 42642219 - 42800636


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862565Full LengthBC152441forkhead box J3
40148791Full LengthBC151828forkhead box J3
100064198Full LengthBC160166forkhead box J3
4622124IncompleteBC014182forkhead box J3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055762  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198850 NP_001185779    
NM_001198851 NP_001185780    
NM_001198852 NP_001185781    
NM_014947 NP_055762 Q9UPW0 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC014182 AAH14182 Q9UPW0
BC151828 AAI51829 Q9UPW0
BC152441 AAI52442 Q9UPW0
BC160166 AAI60166  
AB028964 BAA82993 Q9UPW0
AL157422 CAB75651 Q9UPW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXJ3 NP_001185781 R.norvegicus Foxj3 313554   NP_001101441 95
M.musculus Foxj3 230700 Gene Info NP_766287 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)