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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACTL6B, actin-like 6B
Sequence ID:NM_016188
Entrez Gene ID:51412
Ensembl ID:ENSG00000077080

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 100240727 - 100254049

 Exon Info From UCSC:
NM_016188

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4800261Full LengthBC020944actin-like 6B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057272  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016188 NP_057272 O94805 Actin

Related Sequences

 
mRNAGenPeptSwissProt
AF041475 AAD54678 O94805
BC020944 AAH20944 O94805
HQ447891 ADQ32375  
AB015906 BAA74576 O94805
AK314940 BAG37446 O94805

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACTL6B NP_057272 M.musculus Actl6b 83766 Gene Info NP_113581 100
C.elegans ZK616.4 177325   NP_500801 48
N.crassa NCU02555 3881836   XP_965686 40
S.pombe arp42 2541496   NP_594546 36
S.pombe alp5 2541318   NP_595820 36
S.cerevisiae ARP4 853364   NP_012454 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)