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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SWI5, SWI5 recombination repair homolog (yeast)
Sequence ID:NM_001040011
Entrez Gene ID:375757
Ensembl ID:ENSG00000175854

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 131038520 - 131048813

NM_001040011 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1257131038424131038680
258426131038865131039033
427548131046788131046909
549643131048217131048311
644980131050930131051266

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5168627IncompleteBC029911chromosome 9 open reading frame 119

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040011 NP_001035100 Q1ZZU3  

Related Sequences

 
mRNAGenPeptSwissProt
BC029911 AAH29911 Q1ZZU3
DQ414820 ABD72916 Q1ZZU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SWI5 NP_001035100 M.musculus Swi5 72931 Gene Info NP_780399 75
R.norvegicus Swi5 499779   XP_575112 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)