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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLPSL2, colipase-like 2
Sequence ID:NM_207409
Entrez Gene ID:389383
Ensembl ID:ENSG00000196748

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 35744391 - 35747329

NM_207409 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1883574439135744478
892113574523535745357
2124093574713135747328

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069038Full LengthBC172344chromosome 6 open reading frame 126

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207409 NP_997292 Q6UWE3  

Related Sequences

 
mRNAGenPeptSwissProt
BC172344 AAI72344 Q6UWE3
AY358823 AAQ89182 Q6UWE3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLPSL2 NP_997292 R.norvegicus LOC689425 689425   NP_001128474 59
M.musculus Gm749 328788 Gene Info NP_001030043 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)