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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACSS3, acyl-CoA synthetase short-chain family member 3
Sequence ID:NM_024560
Entrez Gene ID:79611
Ensembl ID:ENSG00000111058

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 81471857 - 81648861

 Exon Info From UCSC:
NM_024560

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4120563Full LengthBC009317acyl-CoA synthetase short-chain family member 3
4902942Full LengthBC015769acyl-CoA synthetase short-chain family member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078836  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_024560 NP_078836 Q9H6R3 EC 6.2.1.1 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009317 AAH09317 Q9H6R3 EC 6.2.1.1
BC015769 AAH15769 Q9H6R3 EC 6.2.1.1
AK025616 BAB15190 Q9H6R3 EC 6.2.1.1
AK074938 BAC11304 Q9H6R3 EC 6.2.1.1
AX764480 CAE00104    
AX764482 CAE00105    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACSS3 NP_078836 M.musculus Acss3 380660 Gene Info NP_001136276 91
R.norvegicus Acss3 314800   NP_001101561 89
A.gambiae AgaP_AGAP001473 1281701   XP_321651 51
D.melanogaster CG6432 42901   NP_651247 47
N.crassa NCU01417 3876832   XP_960685 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)