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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN17, claudin 17
Sequence ID:NM_012131
Entrez Gene ID:26285
Ensembl ID:ENSG00000156282

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 31537885 - 31539044

NM_012131 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17313153824031538970

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069009Full LengthBC101503claudin 17
8069011Full LengthBC101505claudin 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036263  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012131 NP_036263 P56750 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC101503 AAI01504 P56750
BC101505 AAI01506 P56750
AY358094 AAQ88461 P56750

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN17 NP_036263 M.musculus Cldn17 239931 Gene Info NP_852467 82
R.norvegicus Cldn17 304125   NP_001100582 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)