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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. BRE, Brain and reproductive organ-expressed (TNFRSF1A modulator)
Sequence ID:NM_004899
NM_199193
NM_199192
NM_199194
NM_199191
NM_001261840
Entrez Gene ID:9577
Ensembl ID:ENSG00000158019

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 28113616 - 28561765

 Exon Info From UCSC:
NM_004899
NM_199193
NM_199192
NM_199194
NM_199191

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3456561Full LengthBC001251brain and reproductive organ-expressed (TNFRSF1A modulator)
4331653IncompleteBC014088brain and reproductive organ-expressed (TNFRSF1A modulator)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954662  NP_954663  NP_954664  NP_954661  NP_004890  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001261840 NP_001248769    
NM_004899 NP_004890 Q9NXR7 BRE
NM_199191 NP_954661   BRE
NM_199192 NP_954662   BRE
NM_199193 NP_954663   BRE
NM_199194 NP_954664   BRE

Related Sequences

 
mRNAGenPeptSwissProt
L38616 AAA64231 Q9NXR7
AF015767 AAB69387 Q9NXR7
BC001251 AAH01251 Q9NXR7
AF420602 AAL17814 Q9NXR7
AF420603 AAL17816 Q9NXR7
AF420604 AAL17817  
AF420605 AAL17818 Q9NXR7
AY438031 AAR30499 Q9NXR7
DQ891264 ABM82190  
DQ894451 ABM85377  
AK000097 BAA90943 Q9NXR7
AK123076 BAC85532 Q6ZWH1
AK291086 BAF83775 Q9NXR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRE NP_954661 M.musculus Bre 107976 Gene Info NP_653124 99
R.norvegicus Bre 362704   NP_954891 99
A.thaliana AT5G42470 834254   NP_199062 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)