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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RAB3IP, RAB3A interacting protein (rabin3)
Sequence ID:NM_175623
NM_175625
NM_022456
NM_175624
NM_001024647
Entrez Gene ID:117177
Ensembl ID:ENSG00000127328

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 70132641 - 70209503

 Exon Info From UCSC:
NM_175623
NM_175625
NM_022456
NM_175624
NM_001024647

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3846338Full LengthBC015548RAB3A interacting protein (rabin3)
5300636Full LengthBC059358RAB3A interacting protein (rabin3)
3678939IncompleteBC014553RAB3A interacting protein (rabin3)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001019818  NP_071901  NP_783324  NP_783323  NP_783322  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024647 NP_001019818   Sec2p
NM_022456 NP_071901   Sec2p
NM_175623 NP_783322 Q96QF0 Sec2p
NM_175624 NP_783323   Sec2p
NM_175625 NP_783324   Sec2p

Related Sequences

 
mRNAGenPeptSwissProt
BC015548 AAH15548 Q96QF0
BC059358 AAH59358 Q96QF0
AY685922 AAT94123 Q68K28
HQ448523 ADQ33002  
AK026201 BAB15391 Q96QF0
AK027566 BAB55202 Q96QF0
AK027671 BAB55283 Q96QF0
AJ312896 CAC59835 Q96QF0
AJ312897 CAC59836 Q96QF0
AJ312898 CAC59837 Q96QF0
AJ312899 CAC59838 Q96QF0
AJ312900 CAC59839 Q96QF0
AJ312901 CAC59840 Q96QF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB3IP NP_783322 R.norvegicus Rab3ip 29885   NP_059009 91
M.musculus Rab3ip 216363 Gene Info NP_001003950 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)