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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MBD2, methyl-CpG binding domain protein 2
Sequence ID:NM_003927
NM_015832
RefSeqGene ID:NG_029550
Entrez Gene ID:8932
Ensembl ID:ENSG00000134046

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 51681209 - 51731436

 Exon Info From UCSC:
NM_003927
NM_015832

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5496721Full LengthBC032638methyl-CpG binding domain protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056647  NP_003918  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003927 NP_003918 Q9UBB5 MBD
NM_015832 NP_056647   MBD

Related Sequences

 
mRNAGenPeptSwissProt
AF039701 AAC18050 O60535
AF072242 AAC68871 Q9UBB5
AF072246 AAC68875 Q9UBB5
BC032638 AAH32638 Q9UBB5
AL110266 CAH10725 Q69YZ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MBD2 NP_003918 M.musculus Mbd2 17191 Gene Info NP_034903 97
R.norvegicus Mbd2 680172   NP_001108497 96
A.gambiae AgaP_AGAP003982 1278800   XP_318432 52
D.melanogaster MBD-like 41151   NP_649907 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)